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| + | [[Puzzle_Results_1]] - Puzzles from 1001 onward |
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[[Protein classification|Classification by protein fold]] or by [[:Category:Puzzle Results|categories]] |
[[Protein classification|Classification by protein fold]] or by [[:Category:Puzzle Results|categories]] |
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*[[Puzzle 919]] 70 Residue Monomer Design: Strand Constraints |
*[[Puzzle 919]] 70 Residue Monomer Design: Strand Constraints |
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*[[Puzzle 955]] 70 Residue Monomer Design |
*[[Puzzle 955]] 70 Residue Monomer Design |
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| − | *[[Puzzle_969]] |
+ | *[[Puzzle_969]] |
*[[Puzzle 972]] 80 Residue Monomer Design: Pro Loops |
*[[Puzzle 972]] 80 Residue Monomer Design: Pro Loops |
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*[[Puzzle 991]] 60 Residue Monomer Design: SS Design |
*[[Puzzle 991]] 60 Residue Monomer Design: SS Design |
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Revision as of 07:40, 23 December 2014
Puzzle_Results_1 - Puzzles from 1001 onward
Classification by protein fold or by categories
Note: Puzzle 837 is the first puzzle with the New Chapter code updates.
Design
Interface, docking
- Beginner Puzzle (<150): Docking Design
- Puzzle 187 More Core Design
- Puzzle 399 Design the Interface 6b
- Puzzle 395 Improve the Loop
- Puzzle 394 Design the Interface 4b
- Puzzle 393 Design the Interface 7
- Puzzle 391 Design the Interface 6
- Puzzle 389 Design the Interface 5
- Puzzle 401 Quick Loop Puzzle
- Puzzle 402 Design the Interface 8
- Puzzle 405 CO2 Fixation Enzyme
- Puzzle 418 Back me up
- Puzzle 425 H2N2 Flu Design Puzzle 1
- Puzzle 428 H2N2 Flu Design Puzzle 2
- Puzzle 439 H2N2 Flu design Puzzle 1b
- Puzzle 448 H2N2 Flu Design Puzzle 2b
- Puzzle 466 Flu Design Puzzle 3
- Puzzle 471 Loop Remodel Design Puzzle 1
- Puzzle 484 Quick Flu Design Puzzle 1
- Puzzle 489 Quick Flu Design Puzzle 2
- Puzzle 493 Quick Flu Design Puzzle 3
- Puzzle 504 Flu Design Puzzle 4: Unfrozen!
- Puzzle 522 Flu Design Puzzle 5
- Puzzle 529 CO2 and you!
- Puzzle 532 Beginner Flu Puzzle
- Puzzle 537 CO2andYouToo!
- Puzzle 539 Beginner Immunotherapy Design Puzzle
- Puzzle 540 Flu Design Puzzle 6: Unfrozen again!
- Puzzle 543 Beginner Flu Puzzle 2
- Puzzle 545 Beginner Flu Puzzle 3
- Puzzle 571 Tissue Regeneration Design Puzzle
- Puzzle 578 Beginner Flu Puzzle 4
- Puzzle 625 Sepsis Puzzle
- Sepsis test
- Puzzle 633 Return of the Tissue Regeneration Design Puzzle
- Puzzle 640 Frizzled Design Puzzle
- Puzzle 644 Photo-Electric Hydrogenase Catalyst 1
- Puzzle 659 Re-Return of the Tissue Regeneration Design Puzzle
- Puzzle 664 Unlocked Frizzled Design Puzzle
- Puzzle 680 Solo Hand-Folding Sepsis Puzzle
- Puzzle 684 Sepsis Puzzle 680 Open Phase
- Puzzle 697 Second Hand-Folding Sepsis Puzzle
- Puzzle 702 Second Sepsis Puzzle Round 2
- Puzzle 713 5-year-anniversary puzzle: 2011
- Puzzle 718 Hand-Folding Flu Puzzle: Design the Core
- Puzzle 721 Solo Hand-Folding Sepsis Puzzle 3
- Puzzle 722 Design the Core Round 2 (Flu Puzzle 718)
- Puzzle 727 Third Sepsis Puzzle: Round 2
- Puzzle 808 Abeta Binder Piecewise Design
- Puzzle 811 Abeta Binder Redesign: Round 2
- Puzzle 828 Abeta Loop Closure A
- Puzzle 835 SOD1 Hotspot
- Puzzle 879 Ebola Binder Design with Disulfides
- Puzzle 884b 74 Residue Ebola Binder Design
- Puzzle 971c Ebola glycoprotein peptide inhibitor design
- Puzzle 975 Ebola glycoprotein 30-residue inhibitory peptide design
- Puzzle 976 Abeta binder full-length design
- Puzzle 979 Ebola glycoprotein 30-residue inhibitory peptide design 2
- Puzzle 983 Abeta binder full-length design 2
- Puzzle 1000 Breach Ebola's Defences!
- Puzzle 1010 Abeta Binder Redesign
Symmetry
- Beginner Puzzle (<150): Symmetry Design
- Puzzle 553 Symmetric Dimer Freestyle
- Puzzle 555 Symmetric Beta Core Design Puzzle 1
- Puzzle 587 30 Residue Symmetric Dimer Freestyle
- Puzzle 595 30 Residue Symmetric Trimer Freestyle
- Puzzle 597 50 Residue Symmetric Dimer Freestyle
- Puzzle 616 Symmetric Beta Core Design Puzzle 2
- Puzzle 617 40 Residue Symmetry Dimer Freestyle
- Puzzle 623 40 Residue Symmetric Trimer Freestyle
- Puzzle 627 30 Residue Symmetric Dimer of Dimers Freestyle
- Puzzle 629 Symmetric Beta Core Design Puzzle 3
- Puzzle 632 30 Residue Symmetric Tetramer Freestyle
- Puzzle 636 40 Residue Symmetric Dimer of Dimers Freestyle
- Puzzle 638 40 Residue Symmetric Tetramer Freestyle
- Puzzle 652 40 Residue Symmetry Dimer Retry
- Puzzle 656 40 Residue Symmetric Trimer Retry
- Puzzle 670 30 Residue Symmetric Dimer of Dimers Freestyle Retry
- Puzzle 675 Hydrogen-producing Catalyst Dimer
- Puzzle 682 40 Residue Symmetric Trimer
- Puzzle 688 H-Bonding the Hydrogen-producing Catalyst Dimer
- Puzzle 690 76 Residue Dimer
- Puzzle 691 60 Residue Tetramer
- Puzzle 708 Multi-Start 76 Residue Symmetric Dimer
- Puzzle 720 Quick Puzzle: 76 Residue Dimer
- Puzzle 725 Quick 60 Residue Tetramer Redesign
- Puzzle 734 Player-Solution Loop Redesign
- Puzzle 735 Player-Solution Loop Redesign: Round 2
- Puzzle 742 65 Residue Trimer Design
- Puzzle 753 91 Residue Dimer Design
- Puzzle 764 45 Residue Pentamer Design
- Puzzle 769 Quick Loop Redesign
- Puzzle 775 Player-Solution Redesign: Negative Design
- Puzzle 778 58 Residue D2 Tetramer Design
- Puzzle 783 60 Residue Symmetric Dimer with a Disulfide
- Puzzle 805 Ferredoxin Pentamer Design
- Puzzle 814 Ferredoxin Pentamer Design: Round 2
- Puzzle 825 Holiday Snowflake Design
- Puzzle 847 65 Residue Dimer Design
- Puzzle 851 Trimer Interface Redesign: Round 1
- Puzzle 852 Trimer Interface Redesign: Round 2
- Puzzle 859 Attack of the glycines!
- Puzzle 903 Brain Cancer-Related Phosphorylated Id2
- Puzzle 1018b 65 Residue Symmetric Trimer Design
Monomer Puzzles
- Puzzle 676 76 Residue Monomer Freestyle
- Puzzle 687 76 Residue Monomer Repost
- Puzzle 798 57 Residue Monomer Design
- Puzzle 817 65 Residue Monomer Design
- Puzzle 837 65 Residue Monomer Design
- Puzzle 844 65 Residue Monomer Design: Round 2
- Puzzle 854 75 Residue Monomer Design
- Puzzle 860 72 Residue Monomer Design
- Puzzle 866 85 Residue Monomer Design
- Puzzle 878 95 Residue Monomer Design
- Puzzle 870 75 Residue Monomer Design: Strand-Locked
- Puzzle 887 70 Residue Monomer Design: Strand Constrained
- Puzzle 891 80 Residue Monomer Design: Hairpinned
- Puzzle 898b 75 Residue Monomer Design: Weak Helices
- Puzzle 908 70 Residue Monomer Design: Weak Helices
- Puzzle 919 70 Residue Monomer Design: Strand Constraints
- Puzzle 955 70 Residue Monomer Design
- Puzzle_969
- Puzzle 972 80 Residue Monomer Design: Pro Loops
- Puzzle 991 60 Residue Monomer Design: SS Design
- Puzzle 995 70 Residue Monomer Design: SS Design
- Puzzle 998 80 Residue Monomer Design: SS Design
- Puzzle 1002 22 Residue Peptide Design
- Puzzle 1004 70 Residue Design Refinement
- Puzzle 1007 90 Residue Monomer Design: SS Design
- Puzzle 1014 75 Residue Monomer Design: Core Existence
- Puzzle 1017 85 Residue Monomer Design: More Sheets!
- Puzzle 1021 65 Residue Monomer Design: SS Design
- Puzzle 1024 75 Residue Monomer Design: Zero Cysteines
De-Novo Freestyle
- Puzzle 398
- Puzzle 400
- Puzzle 404
- Puzzle 406 Freestyle Nitric Oxide Puzzle
- Puzzle 410
- Puzzle 413
- Puzzle 422
- Puzzle 432
- Puzzle 434
- Puzzle 441 De novo freestyle 10
- Puzzle 444 de novo freestyle 11
- Puzzle 447 De-novo Freestyle 12
- Puzzle 452 De-novo Freestyle 13
- Puzzle 461 Advanced Freestyle Puzzle
- Puzzle 469 De-novo Freestyle 14
- Puzzle 475 U2 RNA auxiliary factor Freestyle
- Puzzle 487 CASP ROLL Puzzle 1
- Puzzle 491 CASP ROLL Puzzle 2
- Puzzle 626 Slightly Different Freestyle Puzzle
- Puzzle 628 Quick Freestyle Puzzlesame protein as Puzzle 626
- Puzzle 635 De-novo Freestyle 15
- Puzzle 637 De-novo Freestyle 16
- Puzzle 639 De-novo Freestyle 17
- Puzzle 669 De-novo Freestyle 18
- Puzzle 671 De-novo Freestyle 19
- Puzzle 679 De-novo Freestyle 20
- Puzzle 686 De-novo Freestyle 21
- Puzzle 693 Hand-Folding De-novo Freestyle 22
- Puzzle 699 De-novo Freestyle 22 Round 2
- Puzzle 703 De-novo Freestyle 23: Hand-folding Round
- Puzzle 706 De-novo Freestyle 23 Round 2
- Puzzle 709 De-novo Freestyle 24: Hand-folding Round
- Puzzle 715 De-novo Freestyle 24: Round 2
- Puzzle 728 De-novo Freestyle 25: Hand-folding Round
- Puzzle 732 Quick De-novo Freestyle 25: Round 2
- Puzzle 737 Unsolved Salmonella Bacteriophage: Freestyle Hand-folding Round
- Puzzle 738 De-novo Freestyle 26: Hand-folding Round
- Puzzle 740 Unsolved Salmonella Bacteriophage: Freestyle Round 2
- Puzzle 743 De-novo Freestyle 26: Round 2
- Puzzle 748 CASP ROLL R0039: Hand-folding Round
- Puzzle 757 De-novo Freestyle 27: Hand-folding Round
- Puzzle 759 Large CASP ROLL R0040
- Puzzle 760 De-novo Freestyle 27: Round 2
- Puzzle 767 De-novo Freestyle 28: Hand-folding Round
- Puzzle771 De-novo Freestyle 28: Round 2
- Puzzle 773 De-novo Freestyle 29: Hand-folding Round
- Puzzle 776 De-novo Freestyle 29: Round 2
- Puzzle_782 De-novo Freestyle 30: Hand-folding Round
- Puzzle 786 De-novo Freestyle 30: Round 2
- Puzzle 791 De-novo Freestyle 31: Hand-folding
- Puzzle 795 De-novo Freestyle 31: Round 2
- Puzzle 803 Revisiting Puzzle 715: Black Belt De-novo
- Puzzle 819 CASP ROLL Target R0043
- Puzzle 820 PduN Microcompartment Protein
- Puzzle 830 De-novo Handfolding
- Puzzle 833 De-novo Freestyle 32: Round 2
- Puzzle 838 De-novo Freestyle 33: Hand-folding Round
- Puzzle 840 CASP ROLL Target R0046
- Puzzle 841 De-novo Freestyle 33: Round 2
- Puzzle 845: Revisiting Puzzle 786
- Puzzle 849a De-novo Freestyle 34 Mutant: Hand-folding Round
- Puzzle 849b De-novo Freestyle 34: Hand-folding Round
- Puzzle 853 De-novo Freestyle 34: Round 2
- Puzzle 857 De-novo Freestyle 35: Hand-folding Round
- Puzzle 861 De-novo Freestyle 35: Round 2
- Puzzle 863 Abeta Peptide
- Puzzle 864 De-novo Freestyle 36: Low Power
- Puzzle 867: De-novo Freestyle 37: Low Power
- Puzzle 868 De-novo Freestyle 36: High Power
- Puzzle 872 De-novo Freestyle 37: High Power
- Puzzle 876 De-novo Freestyle 38: Low Power
- Puzzle 880 De-novo Freestyle 38: High Power
- Puzzle 881 De-novo Freestyle 39: Low Power
- Puzzle 992 De-novo Freestyle 40: Low Power
- Puzzle 996: De-novo Freestyle 41: Low Power
- Puzzle 999 De-novo Freestyle 42: Low Power
- Puzzle 1001 De-novo Freestyle 43: Low Power
- Puzzle 1005 De-novo Freestyle 44: Low Power
- Puzzle 1008 De-novo Freestyle 45: Low Power
- Puzzle 1012 Unsolved De-novo Freestyle
Mini-protein
- Beginner Puzzle (<150): Easy Mini Freestyle
- Puzzle 415
- Puzzle 420 Ebola Ligand
- Puzzle 427 Easy Mini Freestyle Puzzle 1a
- Puzzle 430 Easy Mini Freestyle Puzzle 1b
- New Player Welcome Puzzle
- New Player Puzzle 2: Scorpion Toxin
- Puzzle 495 CASP ROLL Puzzle 3
- Puzzle 499 CASP ROLL Puzzle 3 with Disulfides
- Puzzle 707 Revisiting Puzzle 58 (Insulin Mutant)
- Puzzle 716 Two chains of Insulin Mutant
- Puzzle 719 Two chains of Insulin Mutant Repost
Multi-start
- Puzzle 390
- Puzzle 431 Multi-Start Nuclear Ribonucleoprotein
- Puzzle 437 Multi-Start Server Models
- Puzzle 677 CASP ROLL Target R0026 with symmetry
- Puzzle 678 Large CASP ROLL Target R0027 with symmetry
- Puzzle 1016 Unsolved VEGF protein: Server Starts
Multi-template
- Beginner Puzzle (<150): Mini Arabidopsis Multi-Start Puzzle
- Puzzle 411
- Puzzle 417
- Puzzle 421 Clostridium scindens VPI 12708
- Puzzle 443 Mini Arabidopsis Multi-Start Puzzle
- Puzzle 445 CASP9 Refinement Puzzle 8 - Double Start with constraints
- Puzzle 450 Huge Unsolved Leishmania Parasite Protein
- Puzzle 459 Pseudomonas aeruginosa same protein as puzzle 447
- Puzzle 462 Bacteroides Vulgatus Puzzle same protein as Puzzle 452
- Puzzle 464 Three Templates Alignment Puzzle
- Puzzle 476 Unsolved Nanog Transcription Factor
- Puzzle 481 Unsolved Nanog Transcription Factor 2
- Puzzle 496 CASP ROLL Puzzle 1b
- Puzzle 497 CASP ROLL Puzzle 2b
- Puzzle 503 CASP ROLL Puzzle 3c
- Puzzle 505 Top CASP ROLL Puzzle 2 Predictions
- Puzzle 507 RosettaServer CASP ROLL Puzzle 2 Predictions
- Puzzle 508 CASP ROLL Target R0005
- Puzzle 509 CASP ROLL Puzzle 1 Predictions
- Puzzle 510 RosettaServer CASP ROLL Puzzle 1 Predictions
- Puzzle 511 CASP ROLL Target R0006
- Puzzle 513 RosettaServer CASP ROLL R0005 Predictions
- Puzzle 514 Top CASP ROLL R0005 Predictions
- Puzzle 515 CASP ROLL Target R0007
- Puzzle 516 RosettaServer CASP ROLL R0006 Predictions
- Puzzle 517 CASP ROLL Target R0008
- Puzzle 518 Top CASP ROLL R0006 Predictions
- Puzzle 519 CASP ROLL Target R0009
- Puzzle 520 RosettaServer CASP ROLL R0007 Predictions
- Puzzle 521 RosettaServer CASP ROLL R0008 Predictions
- Puzzle 523 CASP ROLL Target R0010
- Puzzle 524 Symmetry CASP ROLL R0008 Puzzle
- Puzzle 525 RosettaServer CASP ROLL R0003 Predictions
- Puzzle 526 CASP ROLL Target R0011
- Puzzle 527 CASP ROLL Target R0013
- Puzzle 528 CASP ROLL Target R0014
- Puzzle 530 RosettaServer CASP ROLL R0010
- Puzzle 531 RosettaServer CASP ROLL R0009
- Puzzle 533 RosettaServer CASP ROLL R0011
- Puzzle 534 RosettaServer CASP ROLL R0013
- Puzzle 536 CASP ROLL Target R0018
- Puzzle 538 RosettaServer CASP ROLL R0014
- Puzzle 541 RosettaServer CASP ROLL R0018
- Puzzle 546 Quest to the Alignment Puzzle
- Puzzle 548 Pre-CASP blind Alignment Puzzle 1
- Puzzle 550 Pre-CASP blind Alignment Puzzle 2
- Puzzle 551 Pre-CASP blind Alignment Puzzle 3
- Puzzle 552 CASP10 Target T0644
- Puzzle 556 CASP10 Target T0660
- Puzzle 558 CASP10 Target T0668
- Puzzle 559 CASP10 Target T0673
- Puzzle 561 CASP10 Target T0678
- Puzzle 563 Server models for CASP10 T0668
- Puzzle 564 CASP10 Target T0680
- Puzzle 565 Server models for CASP10 T0673
- Puzzle 566 CASP10 Target T0691
- Puzzle 567 Server models for T0678
- Puzzle 569 Server models for T0680
- Puzzle 570 CASP10 Target T0700
- Puzzle 572 Server models for T0691
- Puzzle 574 CASP10 Target T0709
- Puzzle 575 Server models for T0700
- Puzzle 577 CASP10 Refinement Puzzle: TR688
- Puzzle 581 CASP10 Target T0711
- Puzzle 590 CASP10 Target T0728
- Puzzle 592 CASP10 Target T0730
- Puzzle 593 Server models for T0728
- Puzzle 594 Server models for T0730
- Puzzle 599 Server models for T0740
- Puzzle 600 CASP10 Target T0743
- Puzzle 602 Server models for T0743
- Puzzle 641 CASP ROLL Target R0020
- Puzzle 642 CASP ROLL Target R0022
- Puzzle 643 CASP ROLL Target R0021
- Puzzle 645 CASP ROLL Target R0023
- Puzzle 646 Server models for R0020
- Puzzle 648 Server models for R0021
- Puzzle 649 Server models for R0022
- Puzzle 650 Server models for R0023
- Puzzle 653 CASP ROLL Target R0025
- Puzzle 654 Server models for R0025Puzzle 660 Return of the Multi-Start Pseudomonas Aeruginosa
- Puzzle 673 CASP ROLL Target R0026 - Snake Adenovirus
- Puzzle 674 CASP ROLL Target R0027 - Turkey Adenovirus
- Puzzle 683 CASP10 Target T0709 Repost
- Puzzle 689 Hand-Folding CASP10 T0711 Repost
- Puzzle 694 CASP T0711 Disulfide Repost Round 2
- Puzzle 696 Revisiting Puzzle 481 Nanog
- Puzzle 698 Human cancer protein interaction network target
- Puzzle 701 Revisiting CASP ROLL Target R0005
- Puzzle 717 CASP ROLL Target R0034
- Puzzle 723 Server models for R0034
- Puzzle 731 Unsolved Chicken Anemia Virus Protein
- Puzzle 749 Unsolved Salmonella Bacteriophage: Server Starts
- Puzzle 752 CASP ROLL R0039: Round 2 with Templates
- Puzzle 755 Server Models for R0039
- Puzzle 763 Server Models for R0040
- Puzzle 780 De-novo Freestyle 29 with Alignments
- Puzzle 822 CASP ROLL Target R0043: Server Models
- Puzzle 827 CASP ROLL Target R0044: Server Models
- Puzzle 843 CASP ROLL Target R0046: Server Models
- Puzzle 980 Post-CASP Tc848: Multi-Start Server Model Contacts
Predicted contact
- Puzzle 784 De-Novo Freestyle 31 with Predicted Contacts
- Puzzle 794 De-novo Freestyle 28: Predicted Contacts
- Puzzle 871b De-novo Freestyle 36: Predicted Contacts
- Puzzle_875b De-novo Freestyle 37: Predicted Contacts
- Puzzle 883 De-novo Freestyle 38: Predicted Contacts
- Puzzle 885 De-novo Freestyle 39: Predicted Contacts
- Puzzle 973 Post-CASP Tc853: Server Model Contacts
- Puzzle 977 Post-CASP Tc848: Server Model Contacts
- Puzzle 982 Post-CASP Tc785: Relaxed Contacts
- Puzzle 985 Post-CASP Tc818: Relaxed Contacts
- Puzzle 988b: Post-CASP Tc824: Relaxed Contacts
Exploration
- Puzzle 408
- Puzzle 409
- Puzzle 414 New Style Exploration Puzzle Round 1
- Puzzle 416 New Style exploration Puzzle Round 2
- Puzzle 419 New Style Exploration Puzzle Round 3
- Puzzle 424 Exploration Puzzle 2 Round 1
- Puzzle 426 Exploration Puzzle 1 Round 4
- Puzzle 435 Slightly Constrained Exploration Puzzle same protein as Puzzle 433
- Puzzle 442 Slightly Constrained Exploration Puzzle Round 2
- Puzzle 449 CASP9 Refinement Puzzle 8 - Constraints and Exploration (and multistart)
- Puzzle 453 CASP9 Refinement Puzzle 8 - Exporation Round 2
- Puzzle 454 CASP9 Refinement Puzzle 8 - Exporation Round 3
- Puzzle 463 Exploration of 457
- Puzzle 486 Exploration Puzzle of 457 with Constraints
- Puzzle 488 Experimental Exploration Puzzle 1
- Puzzle 502 Experimental Exploration Puzzle Round 2
- Puzzle 620 Quest to the Contact Map
Electron Density
- Beginner Puzzle: Staphylococcus Aureus Electron Density
- Puzzle 438 Electron Density Puzzle 1
- Puzzle 456 Electron Density Puzzle 2
- Puzzle 458 Electron Density Puzzle 3
- Puzzle 472 Electron Density Puzzle 4
- Puzzle 473 Electron Density Puzzle 5
- Puzzle 498 Electron Density Puzzle 6
- Puzzle 512 Electron Density Puzzle 7
- Puzzle 535 Electron Density Puzzle 8
- Puzzle 544 Electron Density Puzzle 8b
- Puzzle 547 Electron Density Puzzle 8c
- Puzzle 621 Electron Density Puzzle 9
- Puzzle 631 Electron Density Puzzle 10
- Puzzle 634 Electron Density Puzzle 11
- Puzzle 647 Electron Density for CASP10 Target T0691
- Puzzle 655 Blind Electron Density 2
- Puzzle 657 Blind Electron Density 3
- Puzzle 662 Blind Electron Density 4
- Puzzle 663 Blind Electron Density 5
- Puzzle 666 Blind Electron Density 6
- Puzzle 681 Blind Electron Density Puzzle 5 Round 2
- Puzzle 714 5-year-anniversary puzzle: 2012
- Puzzle 724 Blind Electron Density Puzzle 7
- Puzzle 730 Blind Electron Density Puzzle 8
- Puzzle 741 Blind Electron Density 9; Now with Templates!
- Puzzle 746 R0034 with Electron Density: Round 1
- Puzzle 750 R0034 with Electron Density: Round 2
- Puzzle 756 Unsolved Salmonella Bacteriophage: Cryo-electron microscopy
- Puzzle 765 Unsolved Salmonella Bacteriophage: Cryo-electron Density with Alignments
- Puzzle 772 Unsolved Salmonella Bacteriophage: Cryo-electron Density with Alignments: Round 2
- Puzzle 787 Unsolved Salmonella Bacteriophage: Trimmed Cryo-electron Density
- Puzzle 807 De-novo Cryo-electron Density: Hand-folding Round
- Puzzle 810 De-novo Cryo-electron Density: Round 2
- Puzzle 813 Unsolved Electron Density: Hand-folding Round
- Puzzlle 816 Unsolved Electron Density: Round 2
- Puzzle 826 Unsolved Electron Density: Round 3
- Puzzle 1020 Revisiting Electron Density Puzzle 663
- Puzzle 1025 Revisiting Electron Density Puzzle 724
Quest to the Native (a.k.a. QTTN)
- Beginner Puzzle : Parabacteroides Distasonis
- Puzzle 397
- Puzzle 392
- Beginner Puzzle: Viral Macrophage Inflammatory Protein
- Puzzle 403
- Beginner Puzzle: Headpiece domain of chicken villin
- Beginner Puzzle: T-cell Lymphoma Invasion Protein
- Beginner Puzzle: Anthrax lethal factor
- Beginner Puzzle: Klebsiella Pneumoniae
- Beginner Puzzle: E.coli Lrp
- Beginner Puzzle: Cold Shock
- Puzzle 446 Quest to the Native vs Electron Density 1 same protein as Puzzle 438
- Beginner Puzzle: Copper Ion Binding
- Puzzle 460 Quest to the SOLVED Monkey Virus Protein
- Beginner Puzzle: Snow Flea Antifreeze Protein
- Puzzle 478 New player puzzle Mycobacterium Tuberculosis Protein
- Puzzle 492 New Player Puzzle: Pollen Allergen Protein
- Beginner Puzzle: T-cell Lymphoma
- Puzzle 554 Quest to the Native CASP ROLL Target R0007
- Potato Multicystatin
- Beginner Puzzle: Streptococcal Protein
- Puzzle 624 Quest to the Native Alignment with Disulfides
- Beginner Puzzle: Platypus Venom
- Beginner Puzzle: Turkey Egg Lysozyme
- Beginner Puzzle: Killer Toxin
- Puzzle 705 Centroid QTTN: Hand-folding Round
- Puzzle 796 Centroid Quest to the Native 202
- Puzzle 986b Post-CASP TR774: Quest to the Native
- Puzzle 989 Post-CASP TR857: Quest to the Native
- Puzzle 993 Post-CASP TR280: Quest to the Native
Other
- Puzzle 412
- Puzzle 429 same protein as Exploration Puzzle 1
- Puzzle 433 Slightly Constrained Puzzle
- Puzzle 436 CASP9 Refinement Puzzle 8A with constraints
- Puzzle 440 CASP9 Refinement Puzzle 8B with constraints same protein as puzzle 436
- Puzzle 451 Unconstrained Refinement Puzzle
- Puzzle 455 Revisiting Puzzle 165
- Puzzle 457 Revisiting Puzzle 137
- Puzzle 467 Revisiting Puzzle 150
- Puzzle 470 Revisiting Puzzle 153
- Puzzle 474 Revisiting Puzzle 157
- Puzzle 477 Revisiting Puzzle 148
- Puzzle 479 Beginner Symmetry Puzzle
- Puzzle 480 Puzzle 457 with constraints
- Puzzle 482 Advanced Alignment Puzzle
- Puzzle 483 Revisiting Puzzle 147
- Puzzle 485 Quick Alignment Puzzle 482
- Puzzle 490 Symmetric Foldon Puzzle
- Puzzle 494 Quick Fix the Loop Puzzle
- Puzzle 500 Cutpoint Puzzle
- Puzzle 506 Revisiting Puzzle 146
- BonusSymmetry CASP ROLL R0007 Puzzle
- Puzzle 542 Advanced Alignment Cutpoint Puzzle
- Puzzle 557 Quick CASP10 T0644 Puzzle
- Puzzle 560 Quick CASP10 T0660 Puzzle
- Puzzle 562 Quick Symmetric CASP10 T0680 Puzzle
- Puzzle 568 Beginner CASP10 Refinement Puzzle: TR644
- Puzzle 573 Advanced CASP10 Refinement Puzzle: TR663
- Puzzle 576 CASP10 Refinement Puzzle: TR661
- Puzzle 579 Beginner CASP10 Refinement Puzzle: TR662
- Puzzle 580 Quick CASP10 Refinement Puzzle: TR663
- Puzzle 582 Beginner CASP10 Refinement Puzzle: TR674
- Puzzle 583 Large CASP10 Refinement Puzzle: TR689
- Puzzle 584 Advanced CASP10 Refinement Puzzle: TR679
- Puzzle 586 Large CASP10 Refinement Puzzle: TR681
- Puzzle 588 Normal Start CASP10 Refinement Puzzle: TR679
- Puzzle 591 Beginner CASP10 Refinement Puzzle: TR671
- Puzzle 598 CASP10 Refinement Puzzle: TR712
- Puzzle 601 CASP10 Refinement Puzzle: TR723
- Puzzle 603 CASP10 Refinement Puzzle: TR705
- Puzzle 604 CASP10 Refinement Puzzle: TR698
- Puzzle 605 CASP10 Refinement Puzzle: TR710
- Puzzle 606 Large CASP10 Refinement Puzzle: TR708
- Puzzle 607 Beginner CASP10 Refinement Puzzle: TR747
- Puzzle 608 Symmetric CASP10 Refinement Puzzle: TR722
- Puzzle 609 Beginner CASP10 Refinement Puzzle: TR696
- Puzzle 610 CASP10 Refinement Puzzle: TR750
- Puzzle 611 CASP10 Refinement Puzzle: TR752
- Puzzle 613 CASP10 Refinement Puzzle: TR655
- Puzzle 614 CASP10 Refinement Puzzle: TR724
- Puzzle 615 CASP10 Refinement Puzzle: TR754
- Puzzle 618 Bonus Impossibly Difficult CASP10 Puzzle
- Puzzle 622 Quick Revisiting Puzzle 455 Part 2
- Puzzle 630 Quick Frozen Cutpoint Puzzle
- Puzzle 658 Revisiting Puzzle 53
- Puzzle 661 Malaria Puzzle
- Puzzle 668 Puzzle 665 Open Phase
- Puzzle 672 Starting Asymmetry
- Puzzle 685 Hand-Folding Refinement of Puzzle 671
- Puzzle 692 Refinement of Puzzle 671 Open Phase
- Puzzle 700 Revisiting Puzzle 52 (Bacteria Energy)
- Puzzle 704 Revisiting Puzzle 54 (Human Fyn 2)
- Puzzle 710 5-year-anniversary puzzle: 2008
- Puzzle 711 5-year-anniversary puzzle: 2009
- Puzzle 729 Revisiting Puzzle 59: TCR Binding Protein
- Puzzle 733 Revisiting Puzzle 60: Beta Barrel
- Puzzle 736 Revisiting Puzzle 63: Spinach Protein
- Puzzle 744 Revisiting Puzzle 65: Short Puzzle
- Puzzle 745 Quick Thioredoxin Repost
- Puzzle 751 Revisiting Puzzle 67: Integrase
- Puzzle 754 Revisiting Puzzle 68: Bos taurus
- Puzzle 762 Quick Revisiting of Puzzle 69: Scorpion Toxin
- Puzzle 761 Revisiting Puzzle 70: Nucleosome Protein
- Puzzle 768 Revisiting Puzzle 72: Glycolysis
- Puzzle 770 Revisiting Puzzle 73: Polycystein
- Puzzle 774 Revisiting Puzzle 74: Platypus Venom
- Puzzle 777 Revisiting Puzzle 75: Antifreeze Protein
- Puzzle 781 Revisiting Puzzle 76: Plant Seed Protein
- Puzzle 785 Revisiting Puzzle 77: Gene Regulation Protein
- Puzzle 790 Quick Revisiting of Puzzle 76: Plant Seed Protein
- Puzzle 793 Revisiting Puzzle 81: Calcium Ion Binding Protein
- Puzzle 797 Revisiting Puzzle 80: Calcium Channel Blocker
- Puzzle 800 Revisiting Puzzle 82: Cytotoxin
- Puzzle 802 Revisiting Puzzle 686: Black Belt De-novo
- Puzzle 804 Revisiting Puzzle 83: Cardiotoxin
- Puzzle 806 Revisiting Puzzle 84: Giant Anemone
- Puzzle 809 Revisiting Puzzle 85: Cell Adhesion Protein
- Puzzle 812 Revisiting Puzzle 86: Nematode
- Puzzle 815 Revisiting Puzzle 87: Zinc Binding Protein
- Puzzle 818 Revisiting Puzzle 88: Monocyte
- Puzzle 821 Revisiting Puzzle 89: Cow Eye
- Puzzle 829 Revisiting Puzzle 91: Viral Protein
- Puzzle 832 Revisiting Puzzle 92: Bacteria
- Puzzle 834 Revisiting Puzzle 93: Spider Toxin
- Puzzle 839 Revisited Puzzle 95: Chicken
- Puzzle 842 Revisiting Puzzle 96: Collagen
- Puzzle 848 Revisiting Puzzle 97: Pig
- Puzzle_850 Revisiting Pumpkin
- Puzzle 855 Revisiting Puzzle 110: Turkey
- Puzzle 858 Revisiting Puzzle 111: Mouse
- Puzzle 862 Revisiting Puzzle 112: Bovine
- Puzzle 865 Revisiting Puzzle 113: White Birch
- Puzzle 869 Revisiting Puzzle 114: Black Mamba
- Puzzle 873 Revisiting Puzzle 115: Exocyst
- Puzzle 877 Revisiting Puzzle 117: Transport Mutant
- Puzzle 882 Revisiting Puzzle 124: PDZ Domain
- Puzzle 974 Revisiting Puzzle 126: Ethanolamine Utilization
- Puzzle 978 Revisiting Puzzle 134: Rice
- Puzzle 981 Revisiting Puzzle 135: E. coli
- Puzzle 984 Revisiting Puzzle 136: Cell Adhesion
- Puzzle 987b Revisiting Puzzle 137: Rosetta Decoy
- Puzzle 990 Revisiting Puzzle 138: Rosetta Decoy 2
- Puzzle 994 Revisiting Puzzle 139: Rosetta Decoy 3
- Puzzle 997 Revisiting Puzzle 140: Rosetta Decoy 4
- Puzzle 1003 Revisiting Puzzle 141: Rosetta Decoy 5
- Puzzle 1006 Revisiting Puzzle 142: Rosetta Decoy 6
- Puzzle 1009 Revisiting Puzzle 143: Rosetta Decoy 7
- Puzzle 1013 Revisiting Puzzle 144: Rosetta Decoy 8
- Puzzle 1015 Revisiting Puzzle 146: Rosetta Decoy 9
- Puzzle 1019 Revisiting Puzzle 147: Rosetta Decoy 10
- Puzzle 1022 Revisiting Puzzle 148: Rosetta Decoy 11
- Puzzle 1023 Revisiting Puzzle 150: Rosetta Decoy 12
CASP11 (scoreboards)
- Puzzle 886 CASP11 Target T0759: Server Models
- Puzzle 889 CASP11 Target T0769: Server Model
- Puzzle 890b CASP11 T0759: WeFold Round
- Puzzle 892 CASP11 Target T0773: Server Models
- Puzzle 893 CASP11 Target T0769: High Power
- Puzzle 894 CASP11 T0763: WeFold Round
- Puzzle 895 CASP11 T0765: WeFold Round
- Puzzle 896 CASP11 T0769: WeFold Round
- Puzzle 897 Large CASP11 Refinement Puzzle: TR760
- Puzzle 899 CASP11 T0773: WeFold Round
- Puzzle 900 Small CASP11 Refinement Puzzle: TR759
- Puzzle 901 CASP11 T0779: WeFold Round
- Puzzle 902 Bonus CASP11 T0779 Symmetry Puzzle
- Puzzle 904 CASP11 T0785: WeFold Round
- Puzzle 905 CASP11 Refinement Target: TR782
- Puzzle_906 CASP 11 WeFold Round
- Puzzle 907b CASP11 Target Ts763: Sparse Data Contacts
- Puzzle 909 Bonus CASP11 T0787 HIV-1 Env Symmetry Puzzle
- Puzzle 910 CASP11 Refinement Target: TR765
- Puzzle 911b CASP11 T0795: WeFold Round
- Puzzle 912 CASP11 Refinement Target: TR768
- Puzzle 913 CASP11 T0797: WeFold Docking
- Puzzle 914 CASP11 Tc763: True Contacts
- Puzzle 915 CASP11 Refinement Target: TR769
- Puzzle 916 CASP11 T0803: WeFold Round
- Puzzle 917 CASP11 T0802: WeFold Round
- Puzzle 918 Extra Credit CASP11 T0804: WeFold
- Puzzle 920b CASP11 Target Ts785: Sparse Data Contacts
- Puzzle 921 CASP11 Refinement Target: TR280
- Puzzle 922 CASP11 Refinement Target: TR780
- Puzzle 923 CASP11 Refinement Target: TR283
- Puzzle 924 CASP11 Refinement Target: TR774
- Puzzle 925 CASP11 Target Tc785: True Contacts
- Puzzle 926 CASP11 T0818: WeFold Round
- Puzzle_927 CASP11
- Puzzle 928 CASP11 Refinement Target: TR792
- Puzzle 929 CASP11 T0820: WeFold Round
- Puzzle 930 CASP11 T0822: WeFold Round
- Puzzle 931 CASP11 T0824: WeFold Round
- Puzzle 932 CASP11 Refinement Target: TR795
- Puzzle 933b CASP11 Target Ts802: Sparse Data Contacts
- Puzzle 934 CASP11 Refinement Target: TR803
- Puzzle 935 Extra Credit CASP11 Refinement Target: TR811
- Puzzle 936 CASP11 Refinement Target: TR829
- Puzzle 937 65 Residue Monomer Design
- Puzzle 938 CASP11 T0838: WeFold Round
- Puzzle 939 CASP11 Target Ts810: Sparse Data Contacts
- Puzzle 940 CASP11 Target Tc802: True Contacts
- Puzzle 941 CASP11 T0842: WeFold Round
- Puzzle_942 CASP11
- Puzzle 943 CASP11 T0844: WeFold Round
- Puzzle 944 CASP11 T0846: WeFold Round
- Puzzle_945 CASP11
- Puzzle 946 CASP11 T0853: WeFold Round
- Puzzle 947 Bonus CASP11 T0848: Quick WeFold Round
- Puzzle 948 CASP11 T0855: Final WeFold Round
- Puzzle 949 CASP11 Target Ts818: Sparse Data Contacts
- Puzzle 950 CASP11 Refinement Target: TR833
- Puzzle 951 CASP11 Target Ts824: Sparse Data Contacts
- Puzzle 952 CASP11 Refinement Target: TR822
- Puzzle 953 CASP11 Refinement Target: TR228
- Puzzle 954 CASP11 Refinement Target: TR828
- Puzzle 956 CASP11 Refinement Target: TR857
- Puzzle 957 CASP11 Refinement Target: TR856
- Puzzle 958 CASP11 Target Ts827: Sparse Data Contacts
- Puzzle 959 CASP11 Target Tc810: True Contacts
- Puzzle 960 CASP11 Refinement Target: TR854
- Puzzle 961 CASP11 Refinement Target: TR837
- Puzzle 962 CASP11 Target Tc818: True Contacts
- Puzzle 963 CASP11 Target Tc824: True Contacts
- Puzzle 964 CASP11 Refinement Target: TR848
- Puzzle 965 CASP11 Target Tc848: True Contacts
- Puzzle 966 CASP11 Target Tc853: True Contacts
- Puzzle 967 CASP11 Target Tc827: True Contacts
- Puzzle 968 Final CASP11 Target Ts812: Sparse Data Contacts