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structure.SetSecondaryStructureSelected

Function
void structure.SetSecondaryStructureSelected(string secondaryStructure)
Description
Set the selected segments secondary structure. Valid values are e=sheet, h=helix, l=loop, m=molecule.
V1 Function Name
replace_ss

structure.SetSecondaryStructureSelected sets the secondary structure for the currently selected segments of the protein.

The following secondary structure codes are valid:

code type
H helix
E sheet
L loop
A auto

The "A" option applies the Auto Structures tool, which determines the presence of sheets and helixes based on patterns of hydrogen bonds.

The structure code "M" used for ligands (molecules) is accepted, but ignored. Any other code causes an error.

See also structure.SetSecondaryStructure.

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